Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3664

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12031 and 12032 are separated by 901 nucleotides12032 and 12033 are separated by 105 nucleotides mRNA_3663: 12031 - K01738 cysK cysteine synthase A, at 288,181 to 289,942 12031 mRNA_3664: 12032 - K15111 SLC25A26 solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26, at 290,844 to 292,094 12032 mRNA_3665: 12033 - HMMPfam-CorA-like Mg2+ transporter protein-PF01544,SUPERFAMILY--SSF143865,SUPERFAMILY--SSF144083, at 292,200 to 295,663 12033

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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289,849 - -0.1
289,859 + -1.1
289,860 + +0.7
290,013 + -1.9
290,018 + +0.4
290,028 - -2.4
290,166 - +0.8
290,293 + -0.2
290,589 + -1.0
290,613 - +1.6
290,869 - +0.0
290,880 + +0.3
290,881 + +0.0
290,923 - -1.1
291,888 - 12032 mRNA_3664 0.83 +1.9
292,165 - +1.2
292,166 + -0.2
292,187 - +0.7
292,192 - +0.4
292,324 + +0.9
292,326 - -1.5
292,451 - +0.2
292,488 + +0.3
292,612 - 12033 mRNA_3665 0.12 -0.6
292,756 + 12033 mRNA_3665 0.16 -0.7
292,888 + 12033 mRNA_3665 0.20 +1.3
292,932 + 12033 mRNA_3665 0.21 -2.4
293,056 - 12033 mRNA_3665 0.25 +0.5

Or see this region's nucleotide sequence