Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3892

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12260 and 12261 are separated by 270 nucleotides mRNA_3892: 12260 - Hypothetical Protein, at 837,987 to 839,368 12260 mRNA_3893: 12261 - K07375 TUBB tubulin beta, at 839,639 to 842,065 12261

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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837,414 - -0.1
837,492 + +0.7
837,535 + +0.2
837,553 - +1.9
837,601 + -0.4
837,635 + +1.5
837,694 + +0.1
837,730 - -0.8
837,763 + +3.4
837,791 + -0.9
838,026 + -1.4
838,207 - 12260 mRNA_3892 0.16 -1.1
838,352 + 12260 mRNA_3892 0.26 +1.2
838,358 - 12260 mRNA_3892 0.27 -0.8
838,439 - 12260 mRNA_3892 0.33 -0.6
838,442 + 12260 mRNA_3892 0.33 +0.5
838,461 + 12260 mRNA_3892 0.34 +1.8
838,801 - 12260 mRNA_3892 0.59 +2.4
838,911 - 12260 mRNA_3892 0.67 +0.4
838,921 + 12260 mRNA_3892 0.68 +0.1
839,189 + 12260 mRNA_3892 0.87 -1.8
839,215 - 12260 mRNA_3892 0.89 -0.3
839,218 + 12260 mRNA_3892 0.89 +1.2
839,255 + +0.9
839,642 - -0.1
839,682 + +1.3
839,911 + 12261 mRNA_3893 0.11 +0.4
840,039 + 12261 mRNA_3893 0.16 -0.3

Or see this region's nucleotide sequence