Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4002

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12370 and 12371 are separated by 390 nucleotides mRNA_4002: 12370 - KOG4089 Predicted mitochondrial ribosomal protein L23, at 1,122,500 to 1,123,489 12370 mRNA_4003: 12371 - K13667 RUMI, KTELC1 protein glucosyltransferase, at 1,123,880 to 1,126,136 12371

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,121,867 - -0.1
1,121,874 - +1.1
1,121,890 - +0.7
1,122,162 - -0.5
1,122,163 - +0.1
1,122,172 - +1.1
1,122,322 - -1.3
1,122,324 - +0.2
1,123,499 - +0.4
1,123,520 - -0.1
1,123,525 + +0.8
1,123,533 + +0.3
1,123,612 - +1.3
1,123,642 - +0.6
1,123,643 + -0.6
1,123,646 - +1.4
1,123,649 + +1.6
1,123,650 - +0.7
1,123,657 + +0.1
1,123,658 - +0.8
1,123,662 + +1.0
1,123,664 - -0.5
1,123,665 - +0.6
1,123,672 + +0.0
1,123,675 - +1.2
1,123,681 + +0.3
1,123,685 + +0.7
1,123,704 + +0.8
1,123,706 - +0.4
1,123,734 - +0.4
1,123,850 + +1.5
1,123,883 - +0.3
1,123,892 - -0.2
1,123,903 + +0.4
1,123,905 - +1.7
1,124,011 + +0.4
1,124,092 + -0.9
1,124,330 - 12371 mRNA_4003 0.20 +1.4
1,124,433 + 12371 mRNA_4003 0.25 -0.3
1,124,483 - 12371 mRNA_4003 0.27 +1.6

Or see this region's nucleotide sequence