Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4326

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12693 and 12694 are separated by 451 nucleotides mRNA_4325: 12693 - K03231 EEF1A elongation factor 1-alpha, at 1,912,299 to 1,914,440 12693 mRNA_4326: 12694 - Hypothetical Protein, at 1,914,892 to 1,915,200 12694

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,914,772 - -0.7
1,914,775 + -0.8
1,914,787 - +0.0
1,914,797 - -1.6
1,914,942 - 12694 mRNA_4326 0.16 +1.1
1,914,945 - 12694 mRNA_4326 0.17 -0.9
1,914,946 + 12694 mRNA_4326 0.17 +1.9
1,914,955 + 12694 mRNA_4326 0.20 -1.0
1,914,955 + 12694 mRNA_4326 0.20 -0.0
1,914,971 - 12694 mRNA_4326 0.26 +0.4
1,915,067 - 12694 mRNA_4326 0.57 -0.3
1,915,111 + 12694 mRNA_4326 0.71 -1.0
1,915,232 - -0.6
1,915,544 + +1.0
1,915,581 - +0.2
1,915,657 + +0.2

Or see this region's nucleotide sequence