Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4613

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4613: 12981 - BLAST phospholipid-translocating ATPase [Microbotryum lychn..., at 598,191 to 598,847 12981

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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597,270 - -1.3
597,287 - -0.2
597,418 + +1.2
597,530 - +2.3
597,533 + -0.3
597,556 + +0.0
597,562 + +1.1
597,564 - +2.0
597,585 - +0.5
597,805 - -0.1
597,833 - -0.3
597,845 - +0.4
597,845 - -0.2
597,848 + +0.3
597,859 + +0.3
597,860 + +1.2
597,861 - +0.9
597,863 - +0.3
597,863 - +0.2
597,864 - +1.3
597,866 + -0.0
597,870 - +2.8
597,871 - -0.3
597,878 + +0.9
597,879 + -0.2
597,880 - -0.3
597,880 - +0.6
597,880 - -1.2
597,886 + -2.2
597,886 + -0.0
597,888 + -0.5
597,888 - +0.3
597,909 + -0.1
597,909 - -0.3
598,024 - +1.6
598,051 + -0.4
598,054 + -0.1
598,059 + +1.8
598,192 + -0.6
598,333 - 12981 mRNA_4613 0.22 +0.2
598,343 + 12981 mRNA_4613 0.23 -0.1
598,467 - 12981 mRNA_4613 0.42 +1.8
598,874 - +0.4
598,909 - -0.8
599,043 + -0.5
599,058 - -0.2
599,061 + -0.2
599,084 + +0.5
599,095 + -0.5
599,493 - -0.3
599,611 - +0.6

Or see this region's nucleotide sequence