Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4671

Experiment: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13038 and 13039 are separated by 200 nucleotides13039 and 13040 are separated by 472 nucleotides mRNA_4670: 13038 - Hypothetical Protein, at 738,816 to 739,415 13038 mRNA_4671: 13039 - Hypothetical Protein, at 739,616 to 741,558 13039 mRNA_4672: 13040 - K11979 UBR7 E3 ubiquitin-protein ligase UBR7, at 742,031 to 743,506 13040

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
738,994 + 13038 mRNA_4670 0.30 +1.9
739,168 + 13038 mRNA_4670 0.59 +1.8
739,343 - 13038 mRNA_4670 0.88 +3.3
739,460 - -0.2
739,481 - -0.5
739,609 + +0.9
739,730 - +2.0
739,743 + +0.1
739,758 + -0.5
740,179 - 13039 mRNA_4671 0.29 +1.3
740,487 - 13039 mRNA_4671 0.45 -0.1
740,963 + 13039 mRNA_4671 0.69 -0.3
741,796 - +0.2
741,822 - -0.9
741,931 + +0.8
741,943 - +0.6
741,962 + +2.6
741,963 - -0.4
742,115 - -0.6
742,123 + -0.6
742,135 + -0.9
742,405 - 13040 mRNA_4672 0.25 +0.6
742,544 - 13040 mRNA_4672 0.35 -0.2

Or see this region's nucleotide sequence