Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6056

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14423 and 14424 are separated by 602 nucleotides14424 and 14425 overlap by 13 nucleotides14425 and 14426 are separated by 232 nucleotides mRNA_6055: 14423 - Hypothetical Protein, at 1,531,470 to 1,536,936 14423 mRNA_6056: 14424 - K13996 EPS1 protein disulfide-isomerase, at 1,537,539 to 1,540,392 14424 mRNA_6057: 14425 - Hypothetical Protein, at 1,540,380 to 1,540,856 14425 mRNA_6058: 14426 - SUPERFAMILY--SSF52047, at 1,541,089 to 1,542,626 14426

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,536,993 + -0.6
1,537,004 - -0.6
1,537,115 + +1.1
1,537,129 - -0.6
1,537,180 + +2.2
1,537,180 + -0.4
1,537,180 + -0.2
1,537,226 + +0.6
1,537,257 - -0.3
1,537,296 - -0.3
1,537,332 - +0.4
1,537,430 + +0.5
1,537,448 + +0.9
1,537,449 - -1.1
1,537,451 - -0.8
1,537,610 + +0.4
1,537,613 - +0.7
1,537,705 - +1.1
1,537,705 - +2.3
1,537,728 - +1.5
1,537,846 + 14424 mRNA_6056 0.11 +1.2
1,537,874 - 14424 mRNA_6056 0.12 -0.0
1,538,010 + 14424 mRNA_6056 0.17 -0.2
1,538,333 - 14424 mRNA_6056 0.28 -0.5
1,538,609 + 14424 mRNA_6056 0.37 +1.2
1,539,052 + 14424 mRNA_6056 0.53 +2.1
1,539,160 - 14424 mRNA_6056 0.57 -0.2
1,539,336 - 14424 mRNA_6056 0.63 +0.7
1,539,339 + 14424 mRNA_6056 0.63 +2.5
1,539,368 + 14424 mRNA_6056 0.64 +0.2
1,539,509 + 14424 mRNA_6056 0.69 -0.2
1,539,796 + 14424 mRNA_6056 0.79 +1.5
1,539,854 - 14424 mRNA_6056 0.81 +1.1
1,539,894 - 14424 mRNA_6056 0.83 -1.5
1,539,895 - 14424 mRNA_6056 0.83 +0.4
1,539,921 + 14424 mRNA_6056 0.83 +0.7
1,540,043 - 14424 mRNA_6056 0.88 +1.6
1,540,143 - +0.6
1,540,186 - -0.3
1,540,191 + +2.6
1,540,301 - +0.5
1,540,353 - +0.3
1,540,481 - 14425 mRNA_6057 0.21 +2.1
1,540,610 + 14425 mRNA_6057 0.48 +0.7
1,540,617 + 14425 mRNA_6057 0.50 -0.3
1,540,618 + 14425 mRNA_6057 0.50 +0.4
1,540,639 + 14425 mRNA_6057 0.54 +2.8
1,540,765 - 14425 mRNA_6057 0.81 +1.9
1,540,963 - -0.9
1,541,105 + -1.0
1,541,113 - +1.3
1,541,190 + -0.0
1,541,371 - 14426 mRNA_6058 0.18 +0.7

Or see this region's nucleotide sequence