Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6358

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14725 and 14726 are separated by 482 nucleotides mRNA_6357: 14725 - HMMPfam-Ribonuclease-III-like-PF14622,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065, at 625,367 to 626,592 14725 mRNA_6358: 14726 - KOG1674 Cyclin, at 627,075 to 629,360 14726

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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626,643 - -1.0
626,648 - +0.6
626,660 - -0.2
626,662 - +0.1
626,663 - -1.0
626,669 - +0.6
626,672 + +1.3
626,672 + +2.3
626,672 + +0.2
626,673 + -0.6
626,778 - +0.3
626,783 - +1.4
626,783 - +0.1
626,803 - +2.2
626,929 + -0.2
626,937 - +0.4
626,952 - +0.6
626,957 + +3.4
626,967 - +0.5
627,070 + +1.5
627,088 - +0.7
627,538 - 14726 mRNA_6358 0.20 +0.3
627,565 - 14726 mRNA_6358 0.21 +2.6
627,675 + 14726 mRNA_6358 0.26 +0.4
627,702 - 14726 mRNA_6358 0.27 +0.2
628,175 + 14726 mRNA_6358 0.48 +0.0
628,417 - 14726 mRNA_6358 0.59 +0.5
628,875 + 14726 mRNA_6358 0.79 -0.0
629,148 - -0.3
629,177 + +0.6
629,181 + -0.1
629,314 - -0.8
629,317 + +0.9
629,341 + +0.3
629,345 - +0.6
629,358 + +0.7
629,419 + -0.3
629,467 + +1.0
629,472 + +0.9
629,481 - +0.5
629,484 - +0.6
629,487 + -0.3
629,499 + +0.1
629,507 - -0.1
629,510 + -0.9
629,512 + -0.4
629,537 + -0.4
629,612 + +0.5
629,632 - -1.1
629,633 - +0.6
629,640 - +1.3
629,689 - +2.4
629,694 + +1.1
629,697 + +0.5
629,729 - -0.1
629,794 + +0.3
629,797 + -1.5
629,809 - +0.5
629,812 - +0.3
629,827 - +2.1
629,842 - -0.1
629,850 + -2.2
629,858 - +0.1
629,859 + -1.8
629,864 + -0.4
629,893 - -1.1
629,899 + -0.6
629,902 + +0.4
629,903 - -0.6
629,911 + -0.6
629,917 - -0.5
629,919 - -0.9
629,926 + +0.9
629,956 + -0.1
629,958 + +1.1
629,959 - +0.3
629,976 - +2.4
629,984 + +1.9
629,985 + +0.8
630,000 - +0.8
630,003 + +1.2
630,004 + -0.5
630,008 + +2.4
630,010 + -1.0
630,013 - +2.7
630,024 + -1.6
630,036 - -0.2
630,040 - +0.8
630,041 + +0.2
630,056 - -0.2
630,064 - -0.7
630,159 + +0.7
630,165 - +0.7
630,169 - -1.4
630,183 + +2.5
630,198 - +0.6
630,220 + -0.7
630,234 + +0.7
630,280 + -0.1
630,281 + -2.0
630,285 - -0.3
630,312 - +0.9
630,325 + -0.4
630,343 - +0.1
630,351 + -2.0
630,355 - +0.8
630,355 - +0.6

Or see this region's nucleotide sequence