Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6654

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15021 and 15022 are separated by 278 nucleotides mRNA_6653: 15021 - K04739 PRKAR cAMP-dependent protein kinase regulator, at 1,354,178 to 1,355,889 15021 mRNA_6654: 15022 - K12462 ARHGDI, RHOGDI Rho GDP-dissociation inhibitor, at 1,356,168 to 1,357,307 15022

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,355,421 + 15021 mRNA_6653 0.73 -0.9
1,355,734 + -0.7
1,356,134 - +2.2
1,357,013 + 15022 mRNA_6654 0.74 +0.6
1,357,020 + 15022 mRNA_6654 0.75 +0.1
1,357,167 - 15022 mRNA_6654 0.88 +1.6
1,357,187 + 15022 mRNA_6654 0.89 +0.0
1,357,201 - +1.1
1,357,324 + +1.8
1,357,325 - +0.5
1,357,348 + +0.8
1,357,587 - +1.0
1,357,588 - +0.3
1,357,603 + +1.0
1,357,608 + -0.5
1,357,615 + -0.8
1,357,615 + +0.2
1,357,616 - +0.3
1,357,730 + -0.4
1,357,735 - +0.2
1,357,737 - +2.9
1,357,745 + +0.1
1,357,745 + +0.5
1,357,749 + +0.3
1,357,754 - +0.3
1,357,757 + +2.9
1,357,894 + -0.6
1,357,908 + -0.6
1,357,910 + +1.6
1,358,027 - +0.6
1,358,045 - +0.6

Or see this region's nucleotide sequence