Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6912

Experiment: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15279 and 15280 are separated by 237 nucleotides mRNA_6911: 15279 - K03660 OGG1 N-glycosylase/DNA lyase, at 415,549 to 417,203 15279 mRNA_6912: 15280 - K12833 SF3B14 pre-mRNA branch site protein p14, at 417,441 to 418,066 15280

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
416,651 - 15279 mRNA_6911 0.67 +0.6
416,663 - 15279 mRNA_6911 0.67 +0.1
416,937 - 15279 mRNA_6911 0.84 +0.4
418,391 - +3.7
418,552 - -0.3
418,673 + +1.5
418,688 + -0.7
418,969 + -1.3

Or see this region's nucleotide sequence