Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6924

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15291 and 15292 are separated by 553 nucleotides15292 and 15293 are separated by 521 nucleotides mRNA_6923: 15291 - Hypothetical Protein, at 439,430 to 443,984 15291 mRNA_6924: 15292 - BLAST PC-Esterase [Xanthophyllomyces dendrorhous], at 444,538 to 446,309 15292 mRNA_6925: 15293 - K02331 POL5, MYBBP1A DNA polymerase phi, at 446,831 to 450,905 15293

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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443,603 - +1.0
443,634 - +0.3
443,757 + +0.2
443,907 - +0.8
443,920 - +0.8
444,077 - +0.4
444,081 - +2.2
444,230 + -1.1
444,243 + -0.1
444,393 - +0.6
444,395 - +1.3
444,400 - +1.2
444,400 - +0.3
444,405 - +0.2
444,418 + +0.9
444,448 + +0.3
444,504 - +1.2
444,505 + -0.7
444,541 + -1.3
444,796 + 15292 mRNA_6924 0.15 -0.1
444,797 + 15292 mRNA_6924 0.15 +0.1
445,073 - 15292 mRNA_6924 0.30 +1.8
445,088 + 15292 mRNA_6924 0.31 -0.0
446,082 - 15292 mRNA_6924 0.87 +1.3
446,095 + 15292 mRNA_6924 0.88 +1.1
446,137 - +0.7
446,242 + +0.9
446,244 - -0.2
446,250 + +1.0
446,387 - +1.0
446,390 + -0.4
446,541 - +0.7
446,671 + -0.4
446,707 - +0.5
446,710 + +0.3
446,734 + +1.1
446,864 - +1.0
446,896 - -0.1
447,006 - +2.2

Or see this region's nucleotide sequence