Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7011

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15378 and 15379 are separated by 264 nucleotides15379 and 15380 are separated by 301 nucleotides mRNA_7010: 15378 - Hypothetical Protein, at 663,898 to 666,099 15378 mRNA_7011: 15379 - Hypothetical Protein, at 666,364 to 668,286 15379 mRNA_7012: 15380 - KOG4364 Chromatin assembly factor-I, at 668,588 to 672,215 15380

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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666,083 + +0.1
666,366 + -1.1
666,611 + 15379 mRNA_7011 0.13 +0.9
666,662 - 15379 mRNA_7011 0.15 +1.1
666,803 + 15379 mRNA_7011 0.23 -1.3
667,106 + 15379 mRNA_7011 0.39 +0.1
667,292 - 15379 mRNA_7011 0.48 -1.0
667,401 + 15379 mRNA_7011 0.54 +0.5
668,106 - -0.0
668,124 - +0.0
668,127 + +1.4
668,136 + +0.3
668,139 - +0.4
668,161 - -1.2
668,161 + +0.0
668,168 + +0.2
668,179 - +1.1
668,179 - -0.4
668,211 + +0.9
668,226 - -0.9
668,227 - -1.1
668,230 + -0.8
668,235 + +0.1
668,259 + +0.9
668,270 - +2.5
668,275 + -0.5
668,285 - -0.9
668,303 - -0.7
668,305 + +0.2
668,306 + +0.5
668,314 - +0.9
668,331 - +0.1
668,339 + +0.2
668,366 - -0.3
668,385 + +0.0
668,388 - +0.4
668,395 - +1.0
668,400 - +0.4
668,402 - -0.3
668,403 - +0.1
668,412 + -0.4
668,425 + +0.5
668,425 - +0.6
668,453 + -0.2
668,465 - +0.7
668,721 + +0.6

Or see this region's nucleotide sequence