Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7170

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15537 and 15538 are separated by 254 nucleotides15538 and 15539 are separated by 254 nucleotides mRNA_7169: 15537 - K13137 STRAP, UNRIP serine-threonine kinase receptor-associated protein, at 1,038,666 to 1,040,206 15537 mRNA_7170: 15538 - Hypothetical Protein, at 1,040,461 to 1,043,299 15538 mRNA_7171: 15539 - Hypothetical Protein, at 1,043,554 to 1,044,696 15539

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,039,688 - 15537 mRNA_7169 0.66 +1.3
1,040,270 - -0.6
1,040,291 - -0.8
1,040,433 + +0.4
1,040,435 - +0.8
1,040,574 + +3.1
1,040,591 - +1.8
1,040,595 - -0.4
1,040,596 + -0.3
1,040,739 + +0.6
1,040,993 - 15538 mRNA_7170 0.19 +0.4
1,041,023 - 15538 mRNA_7170 0.20 +1.0
1,041,186 - 15538 mRNA_7170 0.26 +0.8
1,041,613 - 15538 mRNA_7170 0.41 +1.0
1,041,615 - 15538 mRNA_7170 0.41 +0.4
1,041,899 - 15538 mRNA_7170 0.51 -0.2
1,042,905 + 15538 mRNA_7170 0.86 -0.8
1,043,201 - +0.6
1,043,245 + +1.2
1,043,387 + +0.1
1,043,460 + +1.5
1,043,701 - 15539 mRNA_7171 0.13 +1.0
1,043,750 + 15539 mRNA_7171 0.17 -1.4
1,043,899 - 15539 mRNA_7171 0.30 +0.0
1,044,220 - 15539 mRNA_7171 0.58 +0.9

Or see this region's nucleotide sequence