Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7251

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15618 and 15619 are separated by 322 nucleotides15619 and 15620 are separated by 256 nucleotides mRNA_7250: 15618 - BLAST ClpP/crotonase [Saitoella complicata NRRL Y-17804], at 1,218,970 to 1,220,341 15618 mRNA_7251: 15619 - Hypothetical Protein, at 1,220,664 to 1,222,024 15619 mRNA_7252: 15620 - Hypothetical Protein, at 1,222,281 to 1,223,804 15620

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,219,737 - 15618 mRNA_7250 0.56 +1.7
1,219,941 + 15618 mRNA_7250 0.71 +1.9
1,220,072 - 15618 mRNA_7250 0.80 +2.9
1,220,149 + 15618 mRNA_7250 0.86 -0.9
1,220,160 - 15618 mRNA_7250 0.87 -0.3
1,220,193 - 15618 mRNA_7250 0.89 -0.7
1,220,193 - 15618 mRNA_7250 0.89 +0.1
1,220,194 + 15618 mRNA_7250 0.89 -0.8
1,220,199 + 15618 mRNA_7250 0.90 -1.3
1,220,199 + 15618 mRNA_7250 0.90 +0.4
1,220,205 + +1.4
1,220,331 + -0.3
1,220,360 + +1.6
1,220,374 + +0.2
1,220,377 - -0.2
1,220,626 - +1.0
1,220,673 - +0.8
1,220,816 + 15619 mRNA_7251 0.11 -0.6
1,220,938 + 15619 mRNA_7251 0.20 -1.3
1,220,950 + 15619 mRNA_7251 0.21 -0.7
1,220,956 - 15619 mRNA_7251 0.21 -0.3
1,220,956 - 15619 mRNA_7251 0.21 -0.8
1,221,264 + 15619 mRNA_7251 0.44 +0.4
1,221,338 - 15619 mRNA_7251 0.50 +2.0
1,221,400 + 15619 mRNA_7251 0.54 +0.8
1,221,463 + 15619 mRNA_7251 0.59 +0.3
1,221,581 - 15619 mRNA_7251 0.67 +1.0
1,221,791 + 15619 mRNA_7251 0.83 -0.5
1,221,939 - -0.3
1,222,028 + +0.5
1,222,134 - +0.6
1,222,137 + +0.8
1,222,189 + +1.1
1,222,207 + +0.0
1,222,649 - 15620 mRNA_7252 0.24 +2.0
1,222,691 - 15620 mRNA_7252 0.27 -0.6
1,222,812 + 15620 mRNA_7252 0.35 +0.7
1,222,850 - 15620 mRNA_7252 0.37 +0.1
1,222,945 + 15620 mRNA_7252 0.44 +0.7
1,222,949 - 15620 mRNA_7252 0.44 +1.6

Or see this region's nucleotide sequence