Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7369

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15736 and 15737 are separated by 538 nucleotides15737 and 15738 are separated by 546 nucleotides mRNA_7368: 15736 - K14708 SLC26A11 solute carrier family 26 (sodium-independent sulfate anion transporter), member 11, at 107,448 to 110,616 15736 mRNA_7369: 15737 - KOG1203 Predicted dehydrogenase, at 111,155 to 112,314 15737 mRNA_7370: 15738 - HMMPfam-Oligomerisation domain-PF02410, at 112,861 to 113,422 15738

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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110,272 + 15736 mRNA_7368 0.89 +1.5
110,411 - +2.2
110,411 - +0.5
110,573 + +0.3
110,688 + -0.2
110,708 + +1.0
110,727 + +0.7
110,728 - -0.6
110,731 + -1.5
110,743 + +2.2
110,745 - +0.6
110,747 - -0.1
110,750 + +0.7
110,750 - -0.5
110,755 + +0.3
110,757 + +0.4
110,763 + +0.4
110,764 + -2.0
110,851 - +0.4
110,878 - +0.1
110,886 - -0.3
110,892 - +0.9
110,904 + -0.9
110,904 + -1.2
110,905 - -0.1
110,929 - -0.0
110,945 - +0.7
110,949 - -0.9
110,950 + -0.2
110,958 + -0.0
110,979 - +0.0
111,011 - +0.9
111,022 + -0.3
111,023 - +0.1
111,034 + +2.0
111,040 - -0.3
111,178 - -0.1
111,225 + -0.7
111,886 - 15737 mRNA_7369 0.63 -0.2
112,057 - 15737 mRNA_7369 0.78 +0.9
112,217 - -2.1
112,221 + +1.2
112,231 + +0.2
112,232 - +0.4
112,234 + +1.3
112,243 + +0.7
112,359 + +0.1
112,364 - -0.6
112,368 + +0.7
112,370 + -0.6
112,374 + -0.0
112,382 + +0.2
112,394 + -0.0
112,399 + +0.1
113,297 - 15738 mRNA_7370 0.78 +0.2

Or see this region's nucleotide sequence