Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7436

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15803 and 15804 are separated by 485 nucleotides15804 and 15805 are separated by 399 nucleotides mRNA_7435: 15803 - K09539 DNAJC19 DnaJ homolog subfamily C member 19, at 274,120 to 274,486 15803 mRNA_7436: 15804 - Hypothetical Protein, at 274,972 to 276,124 15804 mRNA_7437: 15805 - K01756 purB, ADSL adenylosuccinate lyase, at 276,524 to 278,511 15805

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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275,317 + 15804 mRNA_7436 0.30 -0.1
275,348 - 15804 mRNA_7436 0.33 -1.6
275,777 + 15804 mRNA_7436 0.70 -1.0
275,832 - 15804 mRNA_7436 0.75 +0.3
276,243 + -0.1
276,483 - -0.4

Or see this region's nucleotide sequence