Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7545

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15912 and 15913 are separated by 59 nucleotides15913 and 15914 are separated by 212 nucleotides mRNA_7544: 15912 - K07552 bcr MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein, at 529,753 to 531,940 15912 mRNA_7545: 15913 - Hypothetical Protein, at 532,000 to 532,304 15913 mRNA_7546: 15914 - K04523 UBQLN, DSK2 ubiquilin, at 532,517 to 534,299 15914

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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531,259 - 15912 mRNA_7544 0.69 +0.4
531,760 - -1.5
532,374 + +0.4
532,401 + -0.6
532,641 - +1.1
532,822 - 15914 mRNA_7546 0.17 -0.8
533,280 - 15914 mRNA_7546 0.43 +2.3

Or see this region's nucleotide sequence