Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7590

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15957 and 15958 are separated by 82 nucleotides15958 and 15959 are separated by 83 nucleotides mRNA_7589: 15957 - K19785 POF1 nicotinamide-nucleotide adenylyltransferase, at 629,580 to 630,504 15957 mRNA_7590: 15958 - Hypothetical Protein, at 630,587 to 632,557 15958 mRNA_7591: 15959 - Hypothetical Protein, at 632,641 to 636,261 15959

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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629,636 - -0.0
629,776 - 15957 mRNA_7589 0.21 -0.1
629,776 + 15957 mRNA_7589 0.21 +0.1
629,783 - 15957 mRNA_7589 0.22 -0.4
629,791 + 15957 mRNA_7589 0.23 +0.9
629,798 + 15957 mRNA_7589 0.24 -1.4
629,800 + 15957 mRNA_7589 0.24 -0.0
629,919 - 15957 mRNA_7589 0.37 +0.6
630,363 - 15957 mRNA_7589 0.85 +0.9
630,389 + 15957 mRNA_7589 0.87 +1.7
630,437 - +1.1
630,842 + 15958 mRNA_7590 0.13 +1.3
630,849 - 15958 mRNA_7590 0.13 -1.2
630,909 + 15958 mRNA_7590 0.16 -0.6
631,441 + 15958 mRNA_7590 0.43 +0.9
631,832 - 15958 mRNA_7590 0.63 -0.5
632,138 - 15958 mRNA_7590 0.79 -2.3
632,159 + 15958 mRNA_7590 0.80 -0.7
632,286 - 15958 mRNA_7590 0.86 -0.7
632,297 - 15958 mRNA_7590 0.87 +1.3
632,313 + 15958 mRNA_7590 0.88 +1.8
632,315 + 15958 mRNA_7590 0.88 +0.7
632,319 + 15958 mRNA_7590 0.88 -0.2
632,370 - +2.0
632,453 + -1.2
632,602 + -0.9
632,621 - -1.5
632,690 - +0.4
632,713 + +0.3
632,758 - +1.4
632,775 + +0.7
632,873 + +1.4
632,876 - -0.4
632,919 + -0.6
632,922 + +1.9
632,963 + +1.2
633,035 - 15959 mRNA_7591 0.11 +0.2
633,047 + 15959 mRNA_7591 0.11 -0.9
633,054 - 15959 mRNA_7591 0.11 +0.6
633,192 - 15959 mRNA_7591 0.15 +1.1
633,201 - 15959 mRNA_7591 0.15 +1.9
633,316 + 15959 mRNA_7591 0.19 -1.2
633,321 - 15959 mRNA_7591 0.19 +1.6
633,368 - 15959 mRNA_7591 0.20 -0.5
633,385 + 15959 mRNA_7591 0.21 +0.0

Or see this region's nucleotide sequence