Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7888

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16255 and 16256 are separated by 206 nucleotides16256 and 16257 are separated by 467 nucleotides mRNA_7887: 16255 - HMMPfam-Uncharacterized conserved protein (DUF2183)-PF09949, at 1,302,822 to 1,306,124 16255 mRNA_7888: 16256 - K12274 SEC72 translocation protein SEC72, at 1,306,331 to 1,307,074 16256 mRNA_7889: 16257 - Hypothetical Protein, at 1,307,542 to 1,308,171 16257

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,305,357 - 16255 mRNA_7887 0.77 +1.2
1,305,399 + 16255 mRNA_7887 0.78 -0.9
1,305,553 + 16255 mRNA_7887 0.83 +2.6
1,305,683 + 16255 mRNA_7887 0.87 -0.3
1,306,014 - +0.2
1,306,111 + +0.1
1,306,127 + -0.0
1,306,273 - -1.3
1,306,719 - 16256 mRNA_7888 0.52 -2.1
1,307,029 - -2.6
1,307,143 - -0.3
1,307,152 - +0.7
1,307,155 + -0.4
1,307,170 + +0.6
1,307,171 + +2.3
1,307,181 + +0.2
1,307,183 - +0.3
1,307,308 - +1.6
1,307,433 + +1.4

Or see this region's nucleotide sequence