Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8114

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16481 and 16482 are separated by 355 nucleotides16482 and 16483 are separated by 410 nucleotides mRNA_8113: 16481 - HMMPfam-Thioesterase-like superfamily-PF13279,SUPERFAMILY--SSF54637, at 450,205 to 451,053 16481 mRNA_8114: 16482 - K09648 IMP2 mitochondrial inner membrane protease subunit 2, at 451,409 to 451,898 16482 mRNA_8115: 16483 - K03868 RBX1, ROC1 RING-box protein 1, at 452,309 to 453,227 16483

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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450,826 + 16481 mRNA_8113 0.73 +0.3
450,915 - 16481 mRNA_8113 0.84 -0.2
452,116 + -0.9
452,240 + -0.4
452,258 - +0.3
452,258 - -0.2

Or see this region's nucleotide sequence