Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_73

Experiment: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8441 and 8442 are separated by 274 nucleotides mRNA_73: 8441 - K00698 CHS1 chitin synthase, at 169,827 to 173,814 8441 mRNA_74: 8442 - KOG3600 Thyroid hormone receptor-associated protein complex, subunit TRAP240, at 174,089 to 180,350 8442

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
168,846 + +0.2
168,861 - -0.0
168,864 - -0.0
168,906 + +0.7
168,935 - -0.2
169,155 - +0.2
169,182 - -0.9
169,202 + +1.2
169,356 + +1.4
169,358 - -0.2
169,648 - -1.1
169,668 - +0.8
169,790 - +0.4
169,840 + -0.1
170,219 + +0.8
170,253 - 8441 mRNA_73 0.11 +1.8
170,901 - 8441 mRNA_73 0.27 -1.4
171,079 + 8441 mRNA_73 0.31 +1.4
171,383 - 8441 mRNA_73 0.39 -0.9
171,551 - 8441 mRNA_73 0.43 +0.1
172,023 - 8441 mRNA_73 0.55 -0.4
172,280 - 8441 mRNA_73 0.62 -0.3
172,438 - 8441 mRNA_73 0.65 +0.2
172,739 + 8441 mRNA_73 0.73 +0.8
172,751 - 8441 mRNA_73 0.73 +1.0
172,813 - 8441 mRNA_73 0.75 -0.1
172,962 + 8441 mRNA_73 0.79 +0.2
173,174 - 8441 mRNA_73 0.84 +0.5
173,424 - +1.1
173,424 + +0.7
173,518 - +2.4
173,553 - +2.3
173,837 + +1.4
173,862 + +1.7
174,086 - -0.3
174,096 - +0.1
174,298 + -0.6
174,298 + +0.1
174,532 + +0.3
174,678 + +0.3

Or see this region's nucleotide sequence