Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1002

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9369 and 9370 are separated by 562 nucleotides mRNA_1001: 9369 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 175,417 to 177,383 9369 mRNA_1002: 9370 - KOG3435 Mitochondrial/chloroplast ribosomal protein L54/L37, at 177,946 to 178,405 9370

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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177,002 - 9369 mRNA_1001 0.81 -0.4
177,021 + 9369 mRNA_1001 0.82 +0.5
177,677 + +0.5
177,854 - +1.1
178,449 + +0.8
178,602 + +1.6
179,177 - +1.4
179,328 - +0.9
179,351 - +0.4
179,383 + +3.2

Or see this region's nucleotide sequence