Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1096

Experiment: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9463 and 9464 are separated by 80 nucleotides mRNA_1095: 9463 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 395,816 to 397,150 9463 mRNA_1096: 9464 - KOG1611 Predicted short chain-type dehydrogenase, at 397,231 to 398,090 9464

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
396,539 - 9463 mRNA_1095 0.54 +1.6
396,955 - 9463 mRNA_1095 0.85 +0.5
397,100 + +0.1
397,134 - -1.0
397,290 + -1.3
397,510 - 9464 mRNA_1096 0.32 +0.7
397,788 + 9464 mRNA_1096 0.65 -0.3
397,992 + 9464 mRNA_1096 0.88 -2.1
398,220 + -1.0
398,254 - -0.4
398,260 - -0.5
398,302 + -1.4
398,386 - -0.4
398,406 - +0.8
398,559 - +0.9
398,565 - -0.6
398,699 + -0.1
398,706 - -0.3
398,707 - -0.9
398,709 - -0.1
398,715 - +0.3
398,718 - +0.1
398,726 - -1.1
398,734 + +1.3
398,864 - -0.6
398,870 - -0.5
398,902 + +1.1
398,912 + +0.4
399,011 + +1.4

Or see this region's nucleotide sequence