Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1434

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9801 and 9802 are separated by 302 nucleotides9802 and 9803 are separated by 209 nucleotides mRNA_1433: 9801 - K17081 PHB2 prohibitin 2, at 269,247 to 270,588 9801 mRNA_1434: 9802 - Hypothetical Protein, at 270,891 to 274,299 9802 mRNA_1435: 9803 - Hypothetical Protein, at 274,509 to 275,627 9803

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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269,894 - 9801 mRNA_1433 0.48 +0.4
270,162 - 9801 mRNA_1433 0.68 +0.1
270,328 + 9801 mRNA_1433 0.81 -0.4
270,330 - 9801 mRNA_1433 0.81 -0.2
270,333 + 9801 mRNA_1433 0.81 +0.7
270,390 + 9801 mRNA_1433 0.85 -0.6
270,484 + +1.9
270,497 + -0.2
270,644 + +0.4
270,650 - +1.1
270,774 - +2.1
270,778 + +1.1
270,927 + +0.6
270,930 + +0.6
270,930 + +0.7
271,071 - +0.9
271,090 - +1.2
271,227 - -1.9
271,994 - 9802 mRNA_1434 0.32 -0.2
272,264 + 9802 mRNA_1434 0.40 -0.3
272,379 - 9802 mRNA_1434 0.44 -0.7
272,538 - 9802 mRNA_1434 0.48 +1.1
272,543 + 9802 mRNA_1434 0.48 +2.2
272,796 + 9802 mRNA_1434 0.56 +2.3
272,829 - 9802 mRNA_1434 0.57 -0.1
273,017 - 9802 mRNA_1434 0.62 +0.3
273,252 - 9802 mRNA_1434 0.69 -0.0
273,860 - 9802 mRNA_1434 0.87 -0.5
274,360 + +0.5
274,903 - 9803 mRNA_1435 0.35 +1.4
275,258 + 9803 mRNA_1435 0.67 -1.1

Or see this region's nucleotide sequence