Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1505

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9872 and 9873 are separated by 74 nucleotides9873 and 9874 are separated by 485 nucleotides mRNA_1504: 9872 - K11251 H2A histone H2A, at 466,293 to 467,391 9872 mRNA_1505: 9873 - Hypothetical Protein, at 467,466 to 468,083 9873 mRNA_1506: 9874 - Hypothetical Protein, at 468,569 to 469,292 9874

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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467,420 - -0.0
467,430 - -0.3
467,559 - 9873 mRNA_1505 0.15 +0.2
467,597 + 9873 mRNA_1505 0.21 -0.1
467,672 + 9873 mRNA_1505 0.33 -0.5
467,677 + 9873 mRNA_1505 0.34 +0.3
467,685 - 9873 mRNA_1505 0.35 +2.1
467,735 - 9873 mRNA_1505 0.44 +0.6
467,738 + 9873 mRNA_1505 0.44 -1.5
467,752 + 9873 mRNA_1505 0.46 +0.4
467,905 - 9873 mRNA_1505 0.71 -1.5
467,995 + 9873 mRNA_1505 0.86 +0.4
468,040 + +1.4
468,143 - -0.8
468,180 + +1.6
468,183 - -0.8
468,185 - +0.7
468,195 + -0.5
468,204 + +1.5
468,210 + +0.2
468,220 - +0.5
468,221 - -0.3
468,254 + +0.3
468,338 + -0.3
468,357 + +1.1
468,361 - +0.4
468,365 + -0.3
468,463 + +0.3
468,541 + +0.2
468,660 - 9874 mRNA_1506 0.13 +0.2

Or see this region's nucleotide sequence