Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2189

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2189: 10557 - K11236 CDC24 cell division control protein 24, at 296,049 to 299,793 10557

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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295,214 + +1.1
295,232 - +0.7
295,238 - -0.6
295,252 + -1.1
295,261 + +2.5
295,270 + +0.0
295,298 + +1.5
295,334 + +0.1
295,337 + +0.3
295,345 + +0.3
295,349 + +1.5
295,355 + +0.5
295,356 - +0.1
295,358 - +2.5
295,374 - -0.1
295,393 - -0.9
295,394 - +0.2
295,398 + +0.1
295,402 + -1.8
295,430 + +1.9
295,515 - +0.9
295,540 + -0.1
295,553 - +1.3
295,625 - +0.6
295,638 + +0.3
295,645 - +0.5
295,652 + +1.4
295,653 + -0.3
295,656 + +0.0
295,661 + -1.3
295,662 + +1.6
295,663 + +2.0
295,683 + -0.1
295,687 + +1.6
295,802 - +0.3
295,803 + +0.7
295,808 + -1.0
295,817 - +0.8
295,825 + -1.3
295,828 + +2.4
295,950 - +1.3
295,973 + +1.3
296,112 - +1.0
296,114 + -1.0
296,148 + +0.7
296,265 + +0.9
296,425 - 10557 mRNA_2189 0.10 +0.3
296,428 + 10557 mRNA_2189 0.10 +0.7
298,822 - 10557 mRNA_2189 0.74 +1.1
298,998 - 10557 mRNA_2189 0.79 +1.4
299,298 - 10557 mRNA_2189 0.87 +1.8
299,746 - +1.9
299,798 + +1.6
299,888 - +0.0
300,093 - +0.9
300,217 - -0.5
300,243 + +1.9
300,332 + +0.1
300,339 - -0.7
300,352 + -0.2
300,356 + +1.4
300,359 - -0.4
300,397 + -0.3
300,503 - +0.8
300,506 - +0.4
300,543 - +0.4
300,619 - +0.1
300,674 + -0.4
300,680 + -0.2
300,688 + +0.8
300,690 + +0.1

Or see this region's nucleotide sequence