Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2231

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10598 and 10599 are separated by 345 nucleotides mRNA_2230: 10598 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112, at 419,903 to 421,996 10598 mRNA_2231: 10599 - Hypothetical Protein, at 422,342 to 422,815 10599

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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422,290 + +0.1
423,038 + +0.9
423,216 + -1.0
423,225 + -0.7
423,317 + +1.1
423,346 - +0.2

Or see this region's nucleotide sequence