Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2321

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10689 and 10690 are separated by 168 nucleotides mRNA_2321: 10689 - K14807 DDX51, DBP6 ATP-dependent RNA helicase DDX51/DBP6, at 604,206 to 606,574 10689 mRNA_2322: 10690 - Hypothetical Protein, at 606,743 to 609,720 10690

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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603,251 - +1.6
606,669 + +0.9
607,269 + 10690 mRNA_2322 0.18 +0.5
607,390 - 10690 mRNA_2322 0.22 -0.2
607,497 - 10690 mRNA_2322 0.25 -0.1

Or see this region's nucleotide sequence