Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3443

Experiment: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11811 and 11812 are separated by 222 nucleotides mRNA_3443: 11811 - K06694 PSMD10 26S proteasome non-ATPase regulatory subunit 10, at 116,448 to 118,253 11811 mRNA_3444: 11812 - Hypothetical Protein, at 118,476 to 119,519 11812

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
115,794 + -0.6
115,815 + -0.9
115,821 + +0.7
115,918 - +0.4
116,082 - +0.3
116,203 - +0.9
116,242 + -1.2
116,254 - +0.4
116,346 + +0.9
116,374 - +0.3
116,655 - 11811 mRNA_3443 0.11 +1.1
116,947 + 11811 mRNA_3443 0.28 -0.2
116,981 + 11811 mRNA_3443 0.30 +0.0
117,075 - 11811 mRNA_3443 0.35 +0.5
117,117 - 11811 mRNA_3443 0.37 +2.3
117,125 - 11811 mRNA_3443 0.37 +0.4
117,818 + 11811 mRNA_3443 0.76 +0.2
118,094 - -0.4
118,108 + +0.8
118,241 + +0.1
118,587 + 11812 mRNA_3444 0.11 +0.0
118,691 + 11812 mRNA_3444 0.21 +0.7
118,817 + 11812 mRNA_3444 0.33 +0.3
118,832 - 11812 mRNA_3444 0.34 +1.3
119,125 - 11812 mRNA_3444 0.62 +0.3
119,154 - 11812 mRNA_3444 0.65 +0.0

Or see this region's nucleotide sequence