Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3837

Experiment: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12205 and 12206 are separated by 345 nucleotides mRNA_3837: 12205 - K01044 CES1 carboxylesterase 1, at 704,391 to 706,480 12205 mRNA_3838: 12206 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 706,826 to 713,191 12206

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
703,452 + -0.3
703,766 + -0.2
703,875 - -0.1
703,893 + -0.2
703,896 + +2.2
703,906 + -5.4
703,909 - -0.9
704,188 + -0.6
704,242 - +0.2
704,347 + -0.1
704,385 - +0.0
704,489 + +0.2
704,616 - 12205 mRNA_3837 0.11 +0.9
704,653 - 12205 mRNA_3837 0.13 -0.6
704,802 + 12205 mRNA_3837 0.20 +2.5
705,061 + 12205 mRNA_3837 0.32 +1.7
705,072 - 12205 mRNA_3837 0.33 +1.6
705,152 + 12205 mRNA_3837 0.36 +0.5
705,196 + 12205 mRNA_3837 0.39 -0.8
705,896 - 12205 mRNA_3837 0.72 -0.0
706,398 + +0.9
706,494 - +0.4
707,153 - +0.1

Or see this region's nucleotide sequence