Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4173

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4173: 12541 - KOG2348 Urea transporter, at 1,533,332 to 1,534,654 12541

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,532,650 - -0.5
1,533,031 - -0.2
1,533,132 + +0.3
1,533,336 + +0.6
1,533,627 + 12541 mRNA_4173 0.22 +1.8
1,533,794 - 12541 mRNA_4173 0.35 -2.5
1,533,959 + 12541 mRNA_4173 0.47 -0.8
1,534,107 + 12541 mRNA_4173 0.59 -0.5
1,534,316 + 12541 mRNA_4173 0.74 +0.3
1,534,337 + 12541 mRNA_4173 0.76 -0.5
1,534,349 + 12541 mRNA_4173 0.77 +0.7
1,534,796 + +0.2
1,534,819 - +0.1
1,534,852 - -1.5
1,534,896 - +1.5
1,535,167 + +0.8
1,535,222 + +0.8
1,535,276 - -0.4
1,535,276 + -0.2

Or see this region's nucleotide sequence