Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4364

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12731 and 12732 are separated by 269 nucleotides mRNA_4363: 12731 - K19562 BIO3-BIO1 bifunctional dethiobiotin synthetase / adenosylmethionine---8-amino-7-oxononanoate aminotransferase, at 7,688 to 10,353 12731 mRNA_4364: 12732 - SUPERFAMILY--SSF48371, at 10,623 to 17,699 12732

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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10,411 + +1.0
10,416 + -0.2
10,568 + +1.4
10,602 + -0.0
10,703 - -0.2
10,714 - +0.6
10,823 + +0.8
12,831 + 12732 mRNA_4364 0.31 +0.6
16,458 + 12732 mRNA_4364 0.82 -1.3
17,318 - -2.3
17,334 + +0.7
17,495 - +0.7
17,536 + +0.3
17,555 - -0.6
17,646 + -2.2
17,777 + +2.5
17,795 + -0.8
17,798 + +1.3
17,798 + -0.8
18,058 - +0.1
18,113 + +1.3
18,275 + +0.3
18,635 - +0.4

Or see this region's nucleotide sequence