Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4579

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4579: 12947 - KOG1399 Flavin-containing monooxygenase, at 508,671 to 511,163 12947

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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507,682 + +1.2
507,721 - +0.2
507,735 + -1.2
507,751 - -0.3
507,775 - +1.2
507,779 - -1.6
507,786 - -0.2
507,800 - +0.1
507,802 - +0.7
507,802 + -0.4
507,807 + -0.6
507,946 + -1.5
507,977 - +0.7
507,990 + +1.9
507,993 - +0.2
507,994 + +1.3
507,996 + +0.3
508,007 - +1.3
508,012 + +1.3
508,033 + +0.5
508,037 + -0.7
508,039 + +0.1
508,042 - +1.5
508,052 - +0.6
508,065 + -0.8
508,084 - -0.8
508,304 + +1.6
508,870 - +1.8
509,022 + 12947 mRNA_4579 0.14 -1.2
510,496 + 12947 mRNA_4579 0.73 -0.5
510,503 + 12947 mRNA_4579 0.73 -0.0
510,629 + 12947 mRNA_4579 0.79 -0.4
510,777 + 12947 mRNA_4579 0.84 +1.4
510,801 + 12947 mRNA_4579 0.85 +0.3
510,932 + +1.2
510,950 + -0.9
511,058 - -0.7
511,064 - +1.2
511,215 - +0.9
511,228 - +0.6
511,236 + +0.6
511,237 - -0.7
511,266 - +0.6
511,276 + +1.9
511,279 + +0.2
511,280 - +0.8
511,296 + -0.8
511,328 + +2.0
511,394 - -1.3
511,413 - +1.1
511,424 + +0.4
511,425 + +0.0
511,537 - -1.2
511,538 - +0.6
511,586 - -1.5
511,690 - -1.0
511,842 - +0.4
511,852 - +1.8
512,140 - -0.2
512,140 + +1.3
512,145 - +1.9
512,155 + -0.1

Or see this region's nucleotide sequence