Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4764

Experiment: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13132 and 13133 are separated by 279 nucleotides mRNA_4764: 13132 - K12842 SR140 U2-associated protein SR140, at 954,648 to 957,720 13132 mRNA_4765: 13133 - SUPERFAMILY--SSF52058, at 958,000 to 961,527 13133

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
953,654 - +0.8
953,828 + +0.7
953,979 + +0.3
954,094 - +0.1
954,114 - +1.7
954,119 - -0.6
954,125 - -1.3
954,127 + -0.8
954,129 + +0.1
954,264 + -0.9
954,281 - -1.7
954,305 + +1.8
954,455 + -0.2
954,560 + +1.1
955,866 + 13132 mRNA_4764 0.40 -2.3
956,118 + 13132 mRNA_4764 0.48 -0.2
956,911 + 13132 mRNA_4764 0.74 -1.0
957,209 + 13132 mRNA_4764 0.83 -1.8
957,506 + +0.6
957,617 - -1.9
957,746 + +2.2
957,789 - -0.1
957,789 - +1.7
957,873 - +0.2
957,880 - +0.9
957,915 - +1.2
957,936 + -0.5
958,033 + -0.1
958,213 + +0.8
958,218 - +0.1
958,225 + +0.0
958,228 - -2.1
958,234 - -0.4
958,547 + 13133 mRNA_4765 0.16 +0.9
958,656 - 13133 mRNA_4765 0.19 -0.2
958,679 + 13133 mRNA_4765 0.19 +0.6

Or see this region's nucleotide sequence