Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5183

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13550 and 13551 are separated by 359 nucleotides mRNA_5182: 13550 - Hypothetical Protein, at 91,915 to 92,880 13550 mRNA_5183: 13551 - K02924 RP-L39e, RPL39 large subunit ribosomal protein L39e, at 93,240 to 93,967 13551

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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92,577 + 13550 mRNA_5182 0.69 +0.1
93,139 + +0.4
93,263 + +0.5
94,468 + +0.7
94,479 + +2.0
94,499 + +1.3
94,610 - +1.0
94,616 + -1.6
94,621 - +1.2
94,632 + -0.7
94,633 + -0.1
94,680 - +0.5
94,762 - +2.1
94,774 - +1.9
94,907 - +1.1
94,922 + -0.7

Or see this region's nucleotide sequence