Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5897

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14264 and 14265 are separated by 104 nucleotides mRNA_5896: 14264 - K07573 CSL4, EXOSC1 exosome complex component CSL4, at 1,191,974 to 1,192,832 14264 mRNA_5897: 14265 - Interpro Mitochondrial import receptor subunit or translocase, at 1,192,937 to 1,193,713 14265

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,192,300 + 14264 mRNA_5896 0.38 +0.1
1,192,306 - 14264 mRNA_5896 0.39 -0.1
1,192,740 - 14264 mRNA_5896 0.89 +0.1
1,192,867 + +0.4
1,192,871 - +0.8
1,192,881 + -0.0
1,192,898 - +1.0
1,192,898 + +0.1
1,192,900 - -2.5
1,192,909 - -0.4
1,192,923 + +0.4
1,193,168 - 14265 mRNA_5897 0.30 -0.2
1,193,356 - 14265 mRNA_5897 0.54 -0.1
1,193,588 - 14265 mRNA_5897 0.84 +2.5
1,193,800 - +2.1
1,193,859 - +0.6
1,193,860 - -0.5
1,193,887 + +1.2
1,193,908 + -1.8
1,193,920 - -1.5
1,193,933 + -0.1
1,194,070 - -0.6
1,194,071 + -0.7
1,194,079 + +0.3
1,194,092 - -0.9
1,194,248 - -1.0
1,194,285 + -0.8
1,194,391 + -0.9
1,194,407 - -0.7
1,194,415 + -1.4

Or see this region's nucleotide sequence