Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6033

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14400 and 14401 are separated by 822 nucleotides mRNA_6032: 14400 - Hypothetical Protein, at 1,486,205 to 1,487,772 14400 mRNA_6033: 14401 - Hypothetical Protein, at 1,488,595 to 1,490,149 14401

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,487,595 + 14400 mRNA_6032 0.89 -0.0
1,487,630 - +0.2
1,487,642 + +0.8
1,487,684 + -0.0
1,487,766 - -0.4
1,487,780 - +0.2
1,487,797 + -0.3
1,487,797 + +1.1
1,487,806 - +0.3
1,488,123 - +0.5
1,488,197 + +1.6
1,488,201 - +0.6
1,488,218 + -0.0
1,488,378 - -0.1
1,488,385 - +2.2
1,488,391 + -0.5
1,488,393 + +0.5
1,488,396 + -2.2
1,488,519 + -0.7
1,488,519 + +1.0
1,488,686 + -0.1
1,488,740 - -1.1
1,489,016 - 14401 mRNA_6033 0.27 -0.6
1,489,020 + 14401 mRNA_6033 0.27 +1.7
1,489,023 - 14401 mRNA_6033 0.28 -1.7
1,489,129 + 14401 mRNA_6033 0.34 -0.2
1,489,153 - 14401 mRNA_6033 0.36 +1.1
1,489,158 + 14401 mRNA_6033 0.36 +1.2
1,489,232 - 14401 mRNA_6033 0.41 +0.1
1,489,281 - 14401 mRNA_6033 0.44 -1.2
1,489,352 - 14401 mRNA_6033 0.49 +0.3
1,489,413 + 14401 mRNA_6033 0.53 -0.7
1,489,610 - 14401 mRNA_6033 0.65 -0.5
1,489,641 + 14401 mRNA_6033 0.67 -0.0
1,489,687 - 14401 mRNA_6033 0.70 +0.3
1,489,693 + 14401 mRNA_6033 0.71 +0.6
1,489,841 - 14401 mRNA_6033 0.80 -0.9
1,489,852 + 14401 mRNA_6033 0.81 +0.4
1,489,889 + 14401 mRNA_6033 0.83 +0.9
1,490,026 + +0.5
1,490,246 + +0.7
1,490,454 - +2.8
1,490,472 + +0.5
1,490,578 + +2.1
1,490,682 - -0.7
1,491,030 - +0.4

Or see this region's nucleotide sequence