Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6034

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14402 and 14403 are separated by 215 nucleotides mRNA_6034: 14402 - K14561 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4, at 1,491,438 to 1,492,813 14402 mRNA_6035: 14403 - Hypothetical Protein, at 1,493,029 to 1,494,012 14403

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,490,454 - +2.8
1,490,472 + +0.5
1,490,578 + +2.1
1,490,682 - -0.7
1,491,030 - +0.4
1,491,403 - -2.0
1,491,440 + +0.6
1,492,877 - +0.6
1,492,886 - -0.5
1,492,908 - +0.1
1,492,965 - -0.2
1,493,124 + +0.8
1,493,198 - 14403 mRNA_6035 0.17 +0.0
1,493,315 + 14403 mRNA_6035 0.29 +1.9
1,493,388 + 14403 mRNA_6035 0.36 -1.8
1,493,519 + 14403 mRNA_6035 0.50 +1.1
1,493,529 + 14403 mRNA_6035 0.51 +0.4
1,493,745 + 14403 mRNA_6035 0.73 -0.2

Or see this region's nucleotide sequence