Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6122

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14490 and 14491 are separated by 464 nucleotides mRNA_6122: 14490 - SUPERFAMILY--SSF53098, at 54,138 to 56,327 14490 mRNA_6123: 14491 - BLAST DNA polymerase [Rhizoctonia solani], at 56,792 to 57,276 14491

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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53,307 + -0.2
53,598 - -0.2
53,711 - +0.8
53,830 + +0.2
54,059 - +0.9
54,160 + -2.0
54,245 - -0.1
54,347 + -0.3
54,884 + 14490 mRNA_6122 0.34 +0.5
54,969 - 14490 mRNA_6122 0.38 +0.3
55,091 + 14490 mRNA_6122 0.44 +1.9
55,184 + 14490 mRNA_6122 0.48 -0.1
55,647 + 14490 mRNA_6122 0.69 +0.3
55,673 - 14490 mRNA_6122 0.70 -0.2
55,888 - 14490 mRNA_6122 0.80 -0.2
55,891 - 14490 mRNA_6122 0.80 -1.6
55,928 + 14490 mRNA_6122 0.82 -0.1
56,387 + +0.2
56,646 + -0.3
56,662 + -0.0
56,666 + -1.1
56,775 - -1.2
56,781 + +0.6
56,864 + 14491 mRNA_6123 0.15 -3.1
57,075 - 14491 mRNA_6123 0.58 +1.5
57,218 - 14491 mRNA_6123 0.88 -1.4

Or see this region's nucleotide sequence