Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6167

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14534 and 14535 are separated by 545 nucleotides14535 and 14536 are separated by 312 nucleotides mRNA_6166: 14534 - Hypothetical Protein, at 156,004 to 157,222 14534 mRNA_6167: 14535 - K11672 ACTR5, ARP5, INO80M actin-related protein 5, at 157,768 to 160,667 14535 mRNA_6168: 14536 - SUPERFAMILY--SSF52047, at 160,980 to 164,129 14536

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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156,832 - 14534 mRNA_6166 0.68 +0.9
156,935 - 14534 mRNA_6166 0.76 -1.5
156,975 - 14534 mRNA_6166 0.80 -1.0
157,097 - 14534 mRNA_6166 0.90 +1.2
157,257 + -0.1
157,547 - +0.1
157,681 - +0.7
157,784 + +0.4
159,711 - 14535 mRNA_6167 0.67 -0.5
160,437 + -0.7
160,995 - +0.1

Or see this region's nucleotide sequence