Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6309

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14676 and 14677 are separated by 425 nucleotides14677 and 14678 are separated by 610 nucleotides mRNA_6308: 14676 - K09326 OTX1 homeobox protein OTX1, at 499,751 to 502,382 14676 mRNA_6309: 14677 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 502,808 to 503,552 14677 mRNA_6310: 14678 - Hypothetical Protein, at 504,163 to 504,987 14678

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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502,400 + -0.1
502,428 + +0.5
502,507 - +0.3
502,515 + -0.1
502,523 - -0.5
502,526 - +0.3
502,527 - -1.1
502,538 + -0.1
502,540 + +1.3
502,669 + +0.1
502,682 + -0.9
502,690 - +0.3
502,712 + +1.0
502,983 + 14677 mRNA_6309 0.23 -0.0
502,987 - 14677 mRNA_6309 0.24 +0.2
503,007 + 14677 mRNA_6309 0.27 -1.2
503,220 - 14677 mRNA_6309 0.55 -1.2
503,281 - 14677 mRNA_6309 0.63 +1.3
503,397 - 14677 mRNA_6309 0.79 +0.5
503,432 - 14677 mRNA_6309 0.84 +1.0
503,728 - +0.3
504,034 + -3.2
504,156 + +0.7

Or see this region's nucleotide sequence