Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6609

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14976 and 14977 are separated by 621 nucleotides14977 and 14978 are separated by 194 nucleotides mRNA_6608: 14976 - HMMPfam-Yqey-like protein-PF09424,SUPERFAMILY--SSF89095, at 1,235,568 to 1,236,163 14976 mRNA_6609: 14977 - KOG1232 Proteins containing the FAD binding domain, at 1,236,785 to 1,239,365 14977 mRNA_6610: 14978 - BLAST related to MSL5-branch point bridging protein [Sporis..., at 1,239,560 to 1,240,604 14978

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,235,831 + 14976 mRNA_6608 0.44 +0.1
1,236,345 - +0.8
1,236,486 + +1.1
1,236,609 - +0.2
1,236,619 + +0.4
1,236,638 + +0.5
1,236,647 + +0.3
1,236,677 - +0.9
1,236,684 - -0.5
1,236,689 + +1.2
1,236,701 - -0.0
1,236,701 + -0.3
1,236,725 + +0.5
1,236,732 + -0.6
1,237,709 + 14977 mRNA_6609 0.36 +0.8
1,237,899 + 14977 mRNA_6609 0.43 -1.8
1,238,580 + 14977 mRNA_6609 0.70 +1.2
1,238,650 + 14977 mRNA_6609 0.72 -0.4
1,239,011 + 14977 mRNA_6609 0.86 -0.4
1,239,297 + +0.5
1,239,298 - -1.9
1,239,299 + +0.1
1,239,329 + +0.7
1,239,744 - 14978 mRNA_6610 0.18 +0.7
1,239,903 + 14978 mRNA_6610 0.33 -0.2

Or see this region's nucleotide sequence