Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6652

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6652: 15020 - K02975 RP-S25e, RPS25 small subunit ribosomal protein S25e, at 1,352,209 to 1,353,144 15020

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,351,536 - +0.0
1,351,547 + -1.5
1,351,667 + +1.1
1,351,672 - +0.7
1,351,686 - -0.1
1,351,709 - -0.1
1,352,850 - 15020 mRNA_6652 0.68 -0.6
1,352,891 - 15020 mRNA_6652 0.73 -1.2
1,353,179 + +0.5
1,353,183 - +0.3
1,353,185 - -0.4
1,353,191 + -0.6
1,353,196 + +2.3
1,353,342 - +0.3
1,353,381 + -0.2
1,353,388 - +1.0
1,353,389 - +0.0
1,353,438 + -1.5
1,353,457 - -0.6
1,353,465 - +0.2
1,353,466 + +0.5
1,353,470 - +0.6
1,353,473 - +1.9
1,353,474 + -0.7
1,353,474 - -0.5
1,353,474 - +0.0
1,353,481 - -0.2
1,353,483 - +0.2
1,353,483 + +0.6
1,353,497 + -0.2
1,353,510 + +1.3
1,353,512 + +0.8
1,353,522 - -0.3
1,353,525 + +1.4
1,353,634 + -0.3
1,353,639 + +1.4
1,353,665 - -0.4
1,353,777 - +0.9
1,353,800 + +0.1
1,353,810 + +2.0
1,353,960 - -1.8

Or see this region's nucleotide sequence