Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7045

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15413 and 15414 are separated by 151 nucleotides mRNA_7045: 15413 - K20288 COG1 conserved oligomeric Golgi complex subunit 1, at 745,065 to 748,525 15413 mRNA_7046: 15414 - K01341 KEX2 kexin, at 748,677 to 751,864 15414

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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744,238 - -0.5
744,244 - -0.7
744,388 - +0.1
744,407 - -0.3
744,411 + -0.8
744,536 - -0.3
744,830 - +1.9
744,838 + -2.0
744,969 - +0.9
744,980 - +1.0
745,006 - +1.1
748,358 - +1.3
748,683 - +2.8

Or see this region's nucleotide sequence