Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7735

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16102 and 16103 are separated by 215 nucleotides mRNA_7734: 16102 - Hypothetical Protein, at 952,488 to 953,987 16102 mRNA_7735: 16103 - Hypothetical Protein, at 954,203 to 954,907 16103

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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953,439 - 16102 mRNA_7734 0.63 +1.4
953,476 - 16102 mRNA_7734 0.66 +1.7
953,544 + 16102 mRNA_7734 0.70 +0.4
953,621 + 16102 mRNA_7734 0.76 -0.5
953,652 - 16102 mRNA_7734 0.78 -0.3
953,667 + 16102 mRNA_7734 0.79 +0.8
953,757 - 16102 mRNA_7734 0.85 +0.6
953,963 - -0.0
954,250 - +0.2
954,261 + +1.2
954,380 - 16103 mRNA_7735 0.25 +0.2
954,716 + 16103 mRNA_7735 0.73 +0.7
954,721 + 16103 mRNA_7735 0.73 -2.0
954,724 - 16103 mRNA_7735 0.74 -2.0
954,825 - 16103 mRNA_7735 0.88 +1.5
954,927 + +0.8
955,444 + +0.4
955,581 - +0.6
955,607 - +0.8
955,610 + -0.1
955,736 + +0.1
955,741 - +1.0
955,747 - -0.9
955,748 + +1.9
955,749 - +0.9
955,750 + -0.1
955,751 - +0.7

Or see this region's nucleotide sequence