Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7922

Experiment: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16289 and 16290 are separated by 514 nucleotides16290 and 16291 are separated by 509 nucleotides mRNA_7921: 16289 - KOG3022 Predicted ATPase, nucleotide-binding, at 25,144 to 26,524 16289 mRNA_7922: 16290 - K17065 DNM1L dynamin 1-like protein, at 27,039 to 30,180 16290 mRNA_7923: 16291 - Hypothetical Protein, at 30,690 to 33,001 16291

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
26,278 + 16289 mRNA_7921 0.82 +0.2
26,518 - +0.1
26,523 + +1.6
26,527 + +0.0
26,531 - +1.4
26,558 - -0.7
26,650 - +0.7
26,674 - +1.0
26,676 - +2.3
26,681 - -0.7
26,683 + -0.4
26,696 + -0.1
26,697 - -0.2
26,702 + -0.1
26,713 + +2.0
26,840 - -2.2
26,842 - +1.3
26,844 - +0.7
26,847 + +1.6
26,849 - +2.9
26,851 + -0.1
26,852 - +0.6
26,856 + -0.2
26,873 - -0.7
26,896 + +1.6
26,902 + -1.2
27,132 - -1.2
28,022 - 16290 mRNA_7922 0.31 -0.3
28,527 + 16290 mRNA_7922 0.47 +1.9
28,556 + 16290 mRNA_7922 0.48 +0.8
28,865 + 16290 mRNA_7922 0.58 +0.1
28,911 + 16290 mRNA_7922 0.60 +1.2
29,218 - 16290 mRNA_7922 0.69 -0.2
29,574 + 16290 mRNA_7922 0.81 +2.9
29,672 - 16290 mRNA_7922 0.84 +0.1
29,952 - -1.5
30,041 + +1.0
30,157 - +0.3
30,188 - +0.8
30,218 + +1.2
30,640 + +0.7
30,643 - -0.1
30,662 - +0.6
30,680 + +0.7
30,800 + +0.4
30,812 - -0.2
30,813 + +0.3
30,954 + 16291 mRNA_7923 0.11 +0.5
30,962 + 16291 mRNA_7923 0.12 +2.4
31,047 - 16291 mRNA_7923 0.15 +0.4
31,062 - 16291 mRNA_7923 0.16 +0.6
31,064 - 16291 mRNA_7923 0.16 +0.4
31,065 + 16291 mRNA_7923 0.16 +0.4
31,068 + 16291 mRNA_7923 0.16 +0.2
31,068 - 16291 mRNA_7923 0.16 +0.3
31,072 + 16291 mRNA_7923 0.17 -1.1
31,084 + 16291 mRNA_7923 0.17 -0.1
31,143 - 16291 mRNA_7923 0.20 -0.7
31,150 + 16291 mRNA_7923 0.20 -0.9

Or see this region's nucleotide sequence