Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7974

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16341 and 16342 are separated by 262 nucleotides16342 and 16343 are separated by 587 nucleotides mRNA_7973: 16341 - KOG3511 Sortilin and related receptors, at 122,692 to 128,410 16341 mRNA_7974: 16342 - Hypothetical Protein, at 128,673 to 129,137 16342 mRNA_7975: 16343 - KOG0762 Mitochondrial carrier protein, at 129,725 to 131,537 16343

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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128,185 - -1.4
128,281 - -0.3
128,321 + -2.2
128,321 + +1.0
128,574 - +0.1
128,574 + +0.5
128,575 + +0.5
128,575 + +0.9
128,575 + -1.6
128,581 + -1.0
128,587 - +0.6
128,598 + -0.2
128,598 - -2.5
128,603 + +0.6
128,603 + +0.6
128,609 + +0.5
128,609 + +0.5
128,614 + -0.4
128,714 + -0.7
128,722 - 16342 mRNA_7974 0.11 -0.6
128,872 - 16342 mRNA_7974 0.43 -1.2
128,877 + 16342 mRNA_7974 0.44 -0.5
128,897 - 16342 mRNA_7974 0.48 +0.7
129,203 + +0.1
129,230 - +0.4
129,307 - -0.7
129,309 + +0.6
129,309 + +0.8
129,312 - +0.4
129,320 - +1.5
129,338 + +3.1
129,462 - -0.4
129,590 + -0.4
129,638 + -0.6
129,730 - -0.6
129,882 - +0.6
129,895 + -1.7
130,032 - 16343 mRNA_7975 0.17 -0.6
130,050 - 16343 mRNA_7975 0.18 +1.7

Or see this region's nucleotide sequence