Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8266

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16633 and 16634 are separated by 780 nucleotides16634 and 16635 are separated by 435 nucleotides mRNA_8265: 16633 - KOG0444 Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats), at 802,560 to 804,214 16633 mRNA_8266: 16634 - K07297 ADIPOR adiponectin receptor, at 804,995 to 806,356 16634 mRNA_8267: 16635 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 806,792 to 809,289 16635

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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804,098 + -0.4
804,109 - +0.2
804,115 + +0.2
804,158 - +0.2
804,158 - +0.0
804,159 + -0.1
804,161 + +2.3
804,161 + +3.2
804,167 - -0.4
804,173 + +0.4
804,179 - -0.5
804,185 - +1.3
804,188 - +0.0
804,192 + +0.4
804,211 - +0.1
804,216 + +0.0
804,221 - +0.5
804,231 - +0.8
804,235 + -0.4
804,244 - +1.0
804,318 + +0.8
804,322 + -0.2
804,323 + +0.8
804,330 + +0.5
804,338 - -0.0
804,455 - +0.9
804,494 + -0.8
804,613 + +3.0
804,634 - -0.7
804,640 - -0.5
804,645 + +0.1
804,658 - -0.1
804,660 - +2.1
804,674 - -0.5
804,701 - +0.6
804,845 - -0.1
804,870 + -0.7
804,891 - +0.5
804,923 - -0.2
805,029 + +0.0
805,068 + +1.1
805,522 - 16634 mRNA_8266 0.39 -0.0
805,938 + 16634 mRNA_8266 0.69 -1.2
806,226 - +1.3
806,271 + +1.2
806,382 - +0.1
806,390 - -0.4
806,508 - +0.1
806,526 + -1.3
806,526 - -0.2
806,528 - +1.5
806,530 - +0.3
806,530 - +0.1
806,539 - +0.5
806,550 - -1.2
806,554 - +0.8
806,557 + -0.3
806,560 + +2.6
806,589 - +0.5
806,639 - -0.3
806,640 + +0.2
806,648 - +2.0
806,691 - -0.2
806,718 + +0.9
806,730 + +0.7
806,969 - -0.1
806,970 + +0.0
806,999 - -1.3
807,168 - 16635 mRNA_8267 0.15 +0.8

Or see this region's nucleotide sequence