Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_386

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8753 and 8754 are separated by 62 nucleotides8754 and 8755 are separated by 371 nucleotides mRNA_385: 8753 - Hypothetical Protein, at 892,828 to 898,381 8753 mRNA_386: 8754 - Hypothetical Protein, at 898,444 to 900,294 8754 mRNA_387: 8755 - Hypothetical Protein, at 900,666 to 901,434 8755

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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897,640 - 8753 mRNA_385 0.87 +0.2
897,652 - 8753 mRNA_385 0.87 +0.0
897,659 - 8753 mRNA_385 0.87 -2.0
897,664 + 8753 mRNA_385 0.87 +0.5
897,790 - 8753 mRNA_385 0.89 +0.0
897,791 + 8753 mRNA_385 0.89 +0.5
897,792 - 8753 mRNA_385 0.89 -0.4
897,806 - 8753 mRNA_385 0.90 +0.8
897,819 + 8753 mRNA_385 0.90 +1.0
897,830 - +0.2
897,838 + +0.3
897,926 + -0.6
897,933 + -0.1
897,939 - -1.0
898,538 - +0.9
898,540 - +0.3
898,801 - 8754 mRNA_386 0.19 +0.6
898,832 + 8754 mRNA_386 0.21 +1.9
899,121 - 8754 mRNA_386 0.37 -0.3
899,733 + 8754 mRNA_386 0.70 +1.6
899,878 - 8754 mRNA_386 0.77 +0.8
900,286 + -2.4

Or see this region's nucleotide sequence