Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_631

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8998 and 8999 are separated by 873 nucleotides mRNA_630: 8998 - K10088 OS9 protein OS-9, at 1,511,055 to 1,513,202 8998 mRNA_631: 8999 - Hypothetical Protein, at 1,514,076 to 1,515,222 8999

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,513,125 - -0.7
1,513,426 - +2.5
1,513,433 - +0.5
1,513,450 - -0.6
1,513,559 - -0.0
1,513,629 + +0.1
1,513,684 - +0.1
1,513,716 + +0.1
1,513,717 + -0.8
1,513,724 + +2.1
1,513,738 + +0.6
1,513,744 + +1.4
1,513,863 - +0.8
1,513,914 - -0.1
1,513,943 - +1.3
1,513,978 - -0.3
1,514,044 - -0.1
1,514,047 + +1.2
1,514,120 - +0.8
1,514,138 + +0.1
1,514,163 - +2.3
1,514,169 + -0.8
1,514,173 - +2.6
1,514,181 - -0.4
1,514,187 - +1.9
1,514,188 + +0.4
1,514,190 + +0.9
1,514,202 - 8999 mRNA_631 0.11 +0.6
1,514,206 + 8999 mRNA_631 0.11 +1.3
1,514,213 + 8999 mRNA_631 0.12 -0.0
1,514,394 + 8999 mRNA_631 0.28 +0.9
1,514,940 - 8999 mRNA_631 0.75 +0.9
1,515,105 + 8999 mRNA_631 0.90 -0.7
1,515,309 + +0.0
1,515,350 - +2.8
1,515,523 - +0.8
1,515,785 - -1.3
1,515,845 + +0.0
1,515,853 - -0.7
1,515,856 - -0.8
1,515,859 + +0.7
1,515,861 - +0.1
1,516,012 + +0.5
1,516,018 - -2.0
1,516,140 - +2.3
1,516,151 + +0.5

Or see this region's nucleotide sequence